Water inside car in front foot wells.

So I noticed today after about 4 days of heavy rain that my footwells in the front, both drivers and passenger side, are wet. The drivers side is worse then the passenger. Also water has been leaking into the trunk. I checked the drains in the sun roof, front, and saw that water drained out under the right right away so am assuming they are not clogged. I checked the drains under the passenger vent outside under the front windshield and wipers. It seemed to drain alright, both the elephant vent in the engine bay as well as the drain under the car. Is there a drain under the drivers side vent where the drivers wiper attaches? If so that seemed clogged because no water came out when checked.
Water was found in the battery box in the trunk. I haven't checked the rear sun roof drains, was going to try and snake them from the rear if clogged.

So suggestions? Also condensation inside cab and trunk today. Thanks